Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kyphoscoliosis peptidase | DUE52_27735 | Not Available | Positive | 6908526 - 6909500 | 37212.1 |
| hypothetical protein | DUE52_27740 | Not Available | Negative | 6909594 - 6910898 | 47199.8 |
| hypothetical protein | DUE52_27745 | Not Available | Negative | 6910928 - 6911434 | 18661.1 |
| histone deacetylase | DUE52_27750 | Not Available | Negative | 6911454 - 6912356 | 34017.2 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_27755 | Not Available | Positive | 6912400 - 6913149 | 27202.4 |
| hypothetical protein | DUE52_27760 | Not Available | Positive | 6913294 - 6913635 | 13070.8 |
| hypothetical protein | DUE52_27765 | Not Available | Negative | 6913766 - 6913966 | 7750.23 |
| hypothetical protein | DUE52_27770 | Not Available | Negative | 6914492 - 6914761 | 10433.2 |
| hypothetical protein | DUE52_27775 | Not Available | Negative | 6914835 - 6915014 | 6817.18 |
| tonb-dependent receptor | DUE52_27780 | Not Available | Negative | 6915422 - 6917815 | 89306.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
