Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | DUE52_02710 | Not Available | Negative | 686736 - 687125 | 13920.7 |
| arac family transcriptional regulator | DUE52_02715 | Not Available | Positive | 687326 - 688195 | 33390.3 |
| tonb-dependent receptor | DUE52_02720 | Not Available | Positive | 688340 - 691561 | 117258.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_02725 | Not Available | Positive | 691576 - 693057 | 54614.1 |
| exo-alpha-sialidase | DUE52_02730 | Not Available | Positive | 693152 - 694495 | 49261.6 |
| exo-alpha-sialidase | DUE52_02735 | Not Available | Positive | 694611 - 696005 | 51532.7 |
| hypothetical protein | DUE52_02740 | Not Available | Positive | 696235 - 698037 | 66908.9 |
| glycoside hydrolase family 32 protein | DUE52_02745 | Not Available | Positive | 698106 - 699674 | 58264.5 |
| exo-alpha-sialidase | DUE52_02750 | Not Available | Positive | 699940 - 701079 | 42184.0 |
| mfs transporter | DUE52_02755 | Not Available | Positive | 701172 - 702431 | 45256.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
