Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2452 domain-containing protein | DUE52_27535 | Not Available | Positive | 6863497 - 6863955 | 17413.8 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | DUE52_27540 | Not Available | Positive | 6864112 - 6864936 | 30573.8 |
| gntr family transcriptional regulator | DUE52_27545 | Not Available | Positive | 6864946 - 6865962 | 39181.4 |
| duf1460 domain-containing protein | DUE52_27550 | Not Available | Negative | 6865935 - 6866831 | 33872.8 |
| type ii toxin-antitoxin system vapc family toxin | DUE52_27555 | Not Available | Negative | 6866962 - 6867369 | 15749.1 |
| hypothetical protein | DUE52_27560 | Not Available | Negative | 6867366 - 6867602 | 8808.68 |
| alpha-amylase | DUE52_27565 | Not Available | Negative | 6867723 - 6869594 | 70710.6 |
| alpha-amylase | DUE52_27570 | Not Available | Positive | 6869736 - 6871613 | 70850.1 |
| beta-phosphoglucomutase | DUE52_27575 | Not Available | Positive | 6871704 - 6872369 | 24030.2 |
| dinb family protein | DUE52_27580 | Not Available | Positive | 6872562 - 6873134 | 22266.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
