Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_27435 | Not Available | Negative | 6836849 - 6837283 | 16672.8 |
| crp/fnr family transcriptional regulator | DUE52_27440 | Not Available | Negative | 6837356 - 6837925 | 22099.6 |
| monooxygenase | DUE52_27445 | Not Available | Negative | 6837953 - 6839101 | 41893.3 |
| sensor protein lyts | DUE52_27450 | Not Available | Negative | 6839230 - 6840567 | 51721.5 |
| aconitate hydratase | DUE52_27455 | Not Available | Negative | 6840804 - 6843071 | 81724.7 |
| glycosyltransferase family 2 protein | DUE52_27460 | Not Available | Negative | 6843278 - 6844051 | 29360.4 |
| hypothetical protein | DUE52_27465 | Not Available | Negative | 6844112 - 6845830 | 65738.6 |
| type i dna topoisomerase | DUE52_27470 | Not Available | Positive | 6846255 - 6848807 | 95261.0 |
| nad-dependent deacylase | DUE52_27475 | Not Available | Positive | 6848972 - 6849682 | 26185.4 |
| yitt family protein | DUE52_27480 | Not Available | Negative | 6849660 - 6850550 | 32367.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
