Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | DUE52_27385 | Not Available | Negative | 6826847 - 6827485 | 24088.1 |
| tryptophan--trna ligase | DUE52_27390 | Not Available | Negative | 6827504 - 6828478 | 36764.0 |
| duf2461 domain-containing protein | DUE52_27395 | Not Available | Positive | 6828623 - 6829333 | 27251.3 |
| duf4332 domain-containing protein | DUE52_27400 | Not Available | Negative | 6829433 - 6829840 | 14644.7 |
| tonb-dependent receptor | DUE52_27405 | Not Available | Negative | 6829928 - 6832006 | 76328.1 |
| hypothetical protein | DUE52_27410 | Not Available | Positive | 6832203 - 6833264 | 40587.8 |
| hypothetical protein | DUE52_27415 | Not Available | Positive | 6833367 - 6834329 | 36718.9 |
| hypothetical protein | DUE52_27420 | Not Available | Positive | 6834360 - 6835418 | 41398.8 |
| dna-binding response regulator | DUE52_27425 | Not Available | Positive | 6835582 - 6836358 | 30033.1 |
| hypothetical protein | DUE52_27430 | Not Available | Negative | 6836368 - 6836838 | 18382.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
