Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_27335 | Not Available | Negative | 6812748 - 6813551 | 30502.5 |
| divalent metal cation transporter | DUE52_27340 | Not Available | Negative | 6813643 - 6814836 | 41608.1 |
| 5-oxoprolinase | DUE52_27345 | Not Available | Negative | 6814883 - 6818674 | 136226.0 |
| hypothetical protein | DUE52_27350 | Not Available | Positive | 6818743 - 6818973 | 8693.33 |
| type ii toxin-antitoxin system vapc family toxin | DUE52_27355 | Not Available | Positive | 6818977 - 6819357 | 14198.3 |
| pig-l family deacetylase | DUE52_27360 | Not Available | Negative | 6819384 - 6821906 | 93405.0 |
| hypothetical protein | DUE52_27365 | Not Available | Negative | 6821906 - 6822118 | 8020.06 |
| sodium-translocating pyrophosphatase | DUE52_27370 | Not Available | Positive | 6822131 - 6824815 | 94024.1 |
| 50s ribosomal protein l25/general stress protein ctc | DUE52_27375 | Not Available | Negative | 6825056 - 6825619 | 20704.2 |
| ribose-phosphate pyrophosphokinase | DUE52_27380 | Not Available | Negative | 6825734 - 6826675 | 34027.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
