Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DUE52_27285 | Not Available | Negative | 6801746 - 6804295 | 95522.9 |
| httm domain-containing protein | DUE52_27290 | Not Available | Negative | 6804276 - 6805625 | 52296.7 |
| peptidase m75, imelysin | DUE52_27295 | Not Available | Negative | 6805625 - 6806785 | 42422.5 |
| duf4856 domain-containing protein | DUE52_27300 | Not Available | Negative | 6806923 - 6808092 | 41351.1 |
| hypothetical protein | DUE52_27305 | Not Available | Negative | 6808279 - 6809604 | 48588.4 |
| sigma-70 family rna polymerase sigma factor | DUE52_27310 | Not Available | Negative | 6809585 - 6810160 | 22486.7 |
| hypothetical protein | DUE52_27315 | Not Available | Negative | 6810231 - 6810761 | 19017.7 |
| hypothetical protein | DUE52_27320 | Not Available | Negative | 6810850 - 6811521 | 24812.7 |
| hypothetical protein | DUE52_27325 | Not Available | Negative | 6811938 - 6812201 | 10305.6 |
| hypothetical protein | DUE52_27330 | Not Available | Negative | 6812222 - 6812746 | 20011.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
