Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease subunit m | DUE52_27235 | Not Available | Positive | 6785714 - 6787948 | 85526.2 |
| hypothetical protein | DUE52_27240 | Not Available | Positive | 6788096 - 6789346 | 46589.4 |
| xre family transcriptional regulator | DUE52_27245 | Not Available | Positive | 6789534 - 6789884 | 13240.6 |
| imma/irre family metallo-endopeptidase | DUE52_27250 | Not Available | Positive | 6789874 - 6790608 | 28292.8 |
| hypothetical protein | DUE52_27255 | Not Available | Positive | 6790620 - 6791156 | 20486.2 |
| abc transporter permease | DUE52_27260 | Not Available | Negative | 6791173 - 6793554 | 88167.0 |
| abc transporter permease | DUE52_27265 | Not Available | Negative | 6793914 - 6796301 | 89298.6 |
| abc transporter permease | DUE52_27270 | Not Available | Negative | 6796672 - 6799110 | 91100.5 |
| padr family transcriptional regulator | DUE52_27275 | Not Available | Negative | 6799512 - 6799847 | 12349.0 |
| glycoside hydrolase family 125 protein | DUE52_27280 | Not Available | Positive | 6800182 - 6801612 | 53928.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
