Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_27185 | Not Available | Positive | 6770892 - 6771599 | 25481.3 |
| hypothetical protein | DUE52_27190 | Not Available | Positive | 6771632 - 6772750 | 40636.1 |
| hypothetical protein | DUE52_27195 | Not Available | Positive | 6772772 - 6773530 | 27503.7 |
| hypothetical protein | DUE52_27200 | Not Available | Positive | 6773562 - 6774260 | 26264.2 |
| m1 family peptidase | DUE52_27205 | Not Available | Positive | 6774468 - 6776867 | 91169.1 |
| abc transporter atp-binding protein | DUE52_27210 | Not Available | Negative | 6776974 - 6778752 | 66654.9 |
| duf1611 domain-containing protein | DUE52_27215 | Not Available | Positive | 6779212 - 6780282 | 38650.7 |
| dipeptide epimerase | DUE52_27220 | Not Available | Positive | 6780272 - 6781345 | 38763.8 |
| amino acid permease | DUE52_27225 | Not Available | Positive | 6781349 - 6782716 | 49206.3 |
| hypothetical protein | DUE52_27230 | Not Available | Positive | 6783067 - 6785463 | 90370.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
