Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | DUE52_02660 | Not Available | Negative | 676441 - 677217 | 27652.2 |
| aldo/keto reductase | DUE52_02665 | Not Available | Negative | 677232 - 678188 | 34846.8 |
| aldolase | DUE52_02670 | Not Available | Negative | 678188 - 678994 | 29643.4 |
| 6-bladed beta-propeller | DUE52_02675 | Not Available | Negative | 679019 - 679975 | 35837.3 |
| phytanoyl-coa dioxygenase family protein | DUE52_02680 | Not Available | Negative | 679977 - 680726 | 28252.4 |
| hypothetical protein | DUE52_02685 | Not Available | Negative | 680802 - 682271 | 53596.6 |
| peptidase m19 | DUE52_02690 | Not Available | Negative | 682320 - 683402 | 41012.2 |
| 3-hydroxyacyl-coa dehydrogenase | DUE52_02695 | Not Available | Negative | 683399 - 684364 | 36413.2 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DUE52_02700 | Not Available | Negative | 684423 - 685733 | 48317.6 |
| 3-hydroxyacyl-coa dehydrogenase family protein | DUE52_02705 | Not Available | Negative | 685743 - 686720 | 36724.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
