Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DUE52_27135 | Not Available | Negative | 6751867 - 6755346 | 130363.0 |
| chat domain-containing protein | DUE52_27140 | Not Available | Negative | 6755436 - 6759047 | 135116.0 |
| chat domain-containing protein | DUE52_27145 | Not Available | Positive | 6759113 - 6761899 | 104421.0 |
| hypothetical protein | DUE52_27150 | Not Available | Negative | 6761896 - 6762591 | 27334.4 |
| sigma-70 family rna polymerase sigma factor | DUE52_27155 | Not Available | Negative | 6762689 - 6763243 | 21248.6 |
| hypothetical protein | DUE52_27160 | Not Available | Positive | 6763434 - 6763622 | 6531.98 |
| hypothetical protein | DUE52_27165 | Not Available | Positive | 6763822 - 6764670 | 32679.8 |
| hypothetical protein | DUE52_27170 | Not Available | Positive | 6764667 - 6765299 | 23852.5 |
| hypothetical protein | DUE52_27175 | Not Available | Negative | 6765292 - 6766884 | 59342.2 |
| hypothetical protein | DUE52_27180 | Not Available | Positive | 6767109 - 6770750 | 132577.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
