Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_27085 | Not Available | Positive | 6734502 - 6735911 | 52015.1 |
| hypothetical protein | DUE52_27090 | Not Available | Negative | 6735908 - 6737035 | 41379.6 |
| sam-dependent methyltransferase | DUE52_27095 | Not Available | Positive | 6737304 - 6738752 | 54539.9 |
| type i restriction endonuclease subunit s | DUE52_27100 | Not Available | Positive | 6738749 - 6740302 | 57991.3 |
| abc transporter | DUE52_27105 | Not Available | Positive | 6740299 - 6741786 | 56239.1 |
| hypothetical protein | DUE52_27110 | Not Available | Negative | 6741852 - 6742991 | 40887.9 |
| glycoside hydrolase family 2 | DUE52_27115 | Not Available | Negative | 6743337 - 6745151 | 68786.9 |
| glutamate carboxypeptidase | DUE52_27120 | Not Available | Negative | 6745600 - 6747789 | 79279.5 |
| duf885 domain-containing protein | DUE52_27125 | Not Available | Positive | 6747926 - 6749668 | 67562.0 |
| hypothetical protein | DUE52_27130 | Not Available | Negative | 6749696 - 6751762 | 75670.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
