Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | DUE52_27035 | Not Available | Negative | 6717800 - 6718261 | 16578.2 |
| fecr family protein | DUE52_27040 | Not Available | Negative | 6718365 - 6719495 | 42921.9 |
| duf5009 domain-containing protein | DUE52_27045 | Not Available | Positive | 6719784 - 6721007 | 44705.8 |
| gliding motility-associated c-terminal domain-containing protein | DUE52_27050 | Not Available | Positive | 6721092 - 6722618 | 56594.5 |
| peptidase s8 | DUE52_27055 | Not Available | Negative | 6722650 - 6724275 | 59374.9 |
| alpha-glucosidase | DUE52_27060 | Not Available | Positive | 6724865 - 6726697 | 69148.1 |
| cold-shock protein | DUE52_27065 | Not Available | Positive | 6726839 - 6727030 | 7045.34 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_27070 | Not Available | Negative | 6727171 - 6728817 | 59188.8 |
| susc/raga family tonb-linked outer membrane protein | DUE52_27075 | Not Available | Negative | 6728845 - 6732039 | 117138.0 |
| histidinol-phosphatase | DUE52_27080 | Not Available | Positive | 6732504 - 6734429 | 73515.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
