Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | DUE52_26985 | Not Available | Positive | 6705229 - 6706284 | 40072.0 |
| smp-30/gluconolactonase/lre family protein | DUE52_26990 | Not Available | Negative | 6706304 - 6707218 | 33229.7 |
| bile acid:sodium symporter family protein | DUE52_26995 | Not Available | Negative | 6707305 - 6708417 | 39862.3 |
| amidohydrolase/deacetylase family metallohydrolase | DUE52_27000 | Not Available | Negative | 6708559 - 6709839 | 46588.4 |
| aminotransferase class v-fold plp-dependent enzyme | DUE52_27005 | Not Available | Negative | 6709964 - 6711196 | 44539.5 |
| cytochrome c class i | DUE52_27010 | Not Available | Negative | 6711215 - 6712675 | 53957.8 |
| cytochrome c | DUE52_27015 | Not Available | Negative | 6712672 - 6713112 | 16375.4 |
| cytochrome c | DUE52_27020 | Not Available | Negative | 6713339 - 6715096 | 64777.7 |
| amidohydrolase/deacetylase family metallohydrolase | DUE52_27025 | Not Available | Negative | 6715135 - 6716382 | 44795.4 |
| aminotransferase class v-fold plp-dependent enzyme | DUE52_27030 | Not Available | Negative | 6716410 - 6717630 | 44120.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
