Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme-binding protein | DUE52_26930 | Not Available | Negative | 6690107 - 6692743 | 95007.9 |
| hypothetical protein | DUE52_26940 | Not Available | Positive | 6694571 - 6694789 | 7807.69 |
| na+/h+ antiporter | DUE52_26945 | Not Available | Negative | 6694969 - 6696555 | 58007.4 |
| flavodoxin family protein | DUE52_26950 | Not Available | Negative | 6696676 - 6697287 | 23269.4 |
| lysr family transcriptional regulator | DUE52_26955 | Not Available | Positive | 6697384 - 6698286 | 34603.7 |
| tigr00341 family protein | DUE52_26960 | Not Available | Negative | 6698301 - 6699695 | 51688.2 |
| chloride channel protein | DUE52_26965 | Not Available | Positive | 6700047 - 6701441 | 50102.1 |
| hypothetical protein | DUE52_26970 | Not Available | Positive | 6701584 - 6703302 | 65247.5 |
| thioredoxin | DUE52_26975 | Not Available | Negative | 6703465 - 6703788 | 12064.8 |
| pas domain-containing sensor histidine kinase | DUE52_26980 | Not Available | Positive | 6704034 - 6705251 | 45894.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
