Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4974 domain-containing protein | DUE52_26880 | Not Available | Negative | 6675837 - 6676844 | 38739.0 |
| rna polymerase sigma-70 factor | DUE52_26885 | Not Available | Negative | 6676944 - 6677573 | 24328.2 |
| sialate o-acetylesterase | DUE52_26890 | Not Available | Negative | 6677866 - 6679266 | 51981.1 |
| fad-dependent oxidoreductase | DUE52_26895 | Not Available | Negative | 6679266 - 6680732 | 52739.5 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_26900 | Not Available | Negative | 6680870 - 6682312 | 53284.4 |
| susc/raga family tonb-linked outer membrane protein | DUE52_26905 | Not Available | Negative | 6682414 - 6685710 | 119539.0 |
| duf4974 domain-containing protein | DUE52_26910 | Not Available | Negative | 6685882 - 6687000 | 42333.5 |
| sigma-70 family rna polymerase sigma factor | DUE52_26915 | Not Available | Negative | 6687070 - 6687705 | 24948.8 |
| llm class flavin-dependent oxidoreductase | DUE52_26920 | Not Available | Positive | 6688402 - 6689448 | 38500.3 |
| 2og-fe(ii) oxygenase | DUE52_26925 | Not Available | Positive | 6689512 - 6690105 | 23105.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
