Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DUE52_26780 | Not Available | Positive | 6643583 - 6644314 | 27893.8 |
| duf3883 domain-containing protein | DUE52_26785 | Not Available | Positive | 6644488 - 6645231 | 28710.2 |
| gfo/idh/moca family oxidoreductase | DUE52_26790 | Not Available | Negative | 6646119 - 6647315 | 44814.3 |
| hypothetical protein | DUE52_26795 | Not Available | Positive | 6647437 - 6647802 | 13964.1 |
| tonb-dependent receptor | DUE52_26800 | Not Available | Positive | 6647948 - 6650245 | 85792.4 |
| glycoside hydrolase | DUE52_26805 | Not Available | Positive | 6650650 - 6650961 | 11065.0 |
| duf4976 domain-containing protein | DUE52_26810 | Not Available | Positive | 6651116 - 6652537 | 53816.5 |
| xylose isomerase | DUE52_26815 | Not Available | Negative | 6652583 - 6653521 | 34560.6 |
| dehydrogenase | DUE52_26820 | Not Available | Negative | 6653536 - 6656646 | 114285.0 |
| fad:protein fmn transferase | DUE52_26825 | Not Available | Negative | 6656712 - 6657704 | 37570.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
