Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DUE52_26730 | Not Available | Negative | 6633825 - 6634295 | 17757.5 |
| hypothetical protein | DUE52_26735 | Not Available | Negative | 6634345 - 6635529 | 43935.6 |
| mbl fold metallo-hydrolase | DUE52_26740 | Not Available | Negative | 6635607 - 6636461 | 32317.2 |
| methionine synthase | DUE52_26745 | Not Available | Negative | 6636592 - 6637617 | 38226.9 |
| aryldialkylphosphatase | DUE52_26750 | Not Available | Negative | 6637557 - 6638555 | 37735.6 |
| fad-dependent oxidoreductase | DUE52_26755 | Not Available | Negative | 6638552 - 6639916 | 49508.7 |
| sugar phosphate isomerase/epimerase | DUE52_26760 | Not Available | Negative | 6639936 - 6640814 | 32860.3 |
| sugar isomerase domain-containing protein | DUE52_26765 | Not Available | Negative | 6640846 - 6641634 | 28584.4 |
| rok family protein | DUE52_26770 | Not Available | Negative | 6641663 - 6642541 | 30630.8 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_26775 | Not Available | Negative | 6642555 - 6643346 | 27669.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
