Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_26680 | Not Available | Negative | 6619413 - 6622619 | 119916.0 |
| dna-binding response regulator | DUE52_26685 | Not Available | Negative | 6622629 - 6623396 | 29501.6 |
| sensor histidine kinase | DUE52_26690 | Not Available | Negative | 6623368 - 6624549 | 44990.0 |
| hypothetical protein | DUE52_26695 | Not Available | Negative | 6624712 - 6629631 | 177743.0 |
| duf3500 domain-containing protein | DUE52_26700 | Not Available | Positive | 6630002 - 6630958 | 36391.6 |
| type ii toxin-antitoxin system hica family toxin | DUE52_26705 | Not Available | Negative | 6630966 - 6631208 | 9135.24 |
| 2-oxoisovalerate dehydrogenase | DUE52_26710 | Not Available | Negative | 6631281 - 6631490 | 7943.39 |
| fad-binding protein | DUE52_26715 | Not Available | Negative | 6631558 - 6632955 | 49781.1 |
| aminoacyl-trna hydrolase | DUE52_26720 | Not Available | Negative | 6632962 - 6633366 | 15565.8 |
| hypothetical protein | DUE52_26725 | Not Available | Positive | 6633452 - 6633817 | 13091.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
