Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4976 domain-containing protein | DUE52_02610 | Not Available | Negative | 660221 - 661786 | 59597.0 |
| sulfatase | DUE52_02615 | Not Available | Negative | 661895 - 663442 | 57371.7 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_02620 | Not Available | Negative | 663812 - 665233 | 53906.8 |
| tonb-dependent receptor | DUE52_02625 | Not Available | Negative | 665358 - 668441 | 112469.0 |
| nad(p)/fad-dependent oxidoreductase | DUE52_02630 | Not Available | Positive | 669076 - 670503 | 51694.1 |
| hypothetical protein | DUE52_02635 | Not Available | Negative | 670513 - 670884 | 13625.2 |
| hypothetical protein | DUE52_02640 | Not Available | Positive | 671175 - 673022 | 69411.8 |
| mandelate racemase/muconate lactonizing enzyme family protein | DUE52_02645 | Not Available | Positive | 673134 - 674390 | 45639.5 |
| d-2-hydroxyacid dehydrogenase | DUE52_02650 | Not Available | Positive | 674395 - 675408 | 37508.5 |
| sialate o-acetylesterase | DUE52_02655 | Not Available | Positive | 675737 - 676444 | 27272.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
