Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DUE52_26630 | Not Available | Positive | 6604573 - 6606258 | 63010.1 |
| hypothetical protein | DUE52_26635 | Not Available | Positive | 6606400 - 6608886 | 90823.9 |
| hypothetical protein | DUE52_26640 | Not Available | Positive | 6609198 - 6609767 | 22923.8 |
| response regulator | DUE52_26645 | Not Available | Positive | 6609838 - 6610353 | 19552.4 |
| response regulator | DUE52_26650 | Not Available | Positive | 6610353 - 6610832 | 18092.8 |
| hypothetical protein | DUE52_26655 | Not Available | Positive | 6610972 - 6611892 | 33417.5 |
| duf1080 domain-containing protein | DUE52_26660 | Not Available | Negative | 6612036 - 6615419 | 121766.0 |
| gfo/idh/moca family oxidoreductase | DUE52_26665 | Not Available | Negative | 6615458 - 6616729 | 47673.5 |
| gfo/idh/moca family oxidoreductase | DUE52_26670 | Not Available | Positive | 6617091 - 6618494 | 52117.9 |
| duf1080 domain-containing protein | DUE52_26675 | Not Available | Positive | 6618645 - 6619343 | 25831.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
