Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase | DUE52_26580 | Not Available | Negative | 6590105 - 6590392 | 10989.2 |
| alpha/beta fold hydrolase | DUE52_26585 | Not Available | Negative | 6590400 - 6591419 | 38515.9 |
| duf2911 domain-containing protein | DUE52_26590 | Not Available | Positive | 6591660 - 6592202 | 19544.9 |
| hypothetical protein | DUE52_26595 | Not Available | Negative | 6592372 - 6594387 | 73284.3 |
| duf1080 domain-containing protein | DUE52_26600 | Not Available | Negative | 6594394 - 6596265 | 67693.5 |
| duf1080 domain-containing protein | DUE52_26605 | Not Available | Positive | 6596859 - 6597650 | 29006.5 |
| iron-regulated protein | DUE52_26610 | Not Available | Positive | 6597823 - 6598707 | 33347.9 |
| rna polymerase sigma-70 factor | DUE52_26615 | Not Available | Negative | 6599025 - 6599624 | 23617.5 |
| fecr family protein | DUE52_26620 | Not Available | Positive | 6599863 - 6600945 | 40269.0 |
| susc/raga family tonb-linked outer membrane protein | DUE52_26625 | Not Available | Positive | 6601160 - 6604561 | 125628.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
