Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathionylspermidine synthase family protein | DUE52_26530 | Not Available | Positive | 6580115 - 6581287 | 44329.3 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_26535 | Not Available | Negative | 6581292 - 6582089 | 28042.6 |
| doxx family protein | DUE52_26540 | Not Available | Positive | 6582246 - 6582593 | 13010.5 |
| n-acetyltransferase | DUE52_26545 | Not Available | Negative | 6582584 - 6583132 | 20701.8 |
| m13 family peptidase | DUE52_26550 | Not Available | Positive | 6583475 - 6585511 | 76644.8 |
| hypothetical protein | DUE52_26555 | Not Available | Negative | 6585517 - 6585954 | 15737.7 |
| aminotransferase class v-fold plp-dependent enzyme | DUE52_26560 | Not Available | Negative | 6586313 - 6587389 | 40514.4 |
| hypothetical protein | DUE52_26565 | Not Available | Negative | 6587396 - 6587833 | 16909.2 |
| phosphoglycerate dehydrogenase | DUE52_26570 | Not Available | Negative | 6587848 - 6589752 | 70667.0 |
| duf86 domain-containing protein | DUE52_26575 | Not Available | Negative | 6589762 - 6590121 | 13800.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
