Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_26480 | Not Available | Negative | 6567484 - 6568890 | 53083.5 |
| caspase family protein | DUE52_26485 | Not Available | Negative | 6568887 - 6570008 | 41339.6 |
| hypothetical protein | DUE52_26490 | Not Available | Negative | 6570073 - 6570810 | 26724.3 |
| lamg domain-containing protein | DUE52_26495 | Not Available | Negative | 6570825 - 6571616 | 29484.9 |
| glycosidase | DUE52_26500 | Not Available | Negative | 6571871 - 6573358 | 56981.9 |
| glycosyltransferase | DUE52_26505 | Not Available | Negative | 6573465 - 6575765 | 85891.1 |
| patched family protein | DUE52_26510 | Not Available | Positive | 6576070 - 6578430 | 88026.0 |
| duf4286 family protein | DUE52_26515 | Not Available | Negative | 6578549 - 6578851 | 11970.4 |
| cytochrome b | DUE52_26520 | Not Available | Positive | 6579009 - 6579470 | 17429.1 |
| hypothetical protein | DUE52_26525 | Not Available | Positive | 6579549 - 6580046 | 18626.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
