Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_26380 | Not Available | Negative | 6541861 - 6542253 | 13919.6 |
| sensor histidine kinase | DUE52_26385 | Not Available | Positive | 6542746 - 6543816 | 40833.2 |
| dna-binding response regulator | DUE52_26390 | Not Available | Positive | 6543813 - 6544568 | 28625.7 |
| tagaturonate reductase | DUE52_26395 | Not Available | Negative | 6544540 - 6546084 | 57908.8 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DUE52_26400 | Not Available | Negative | 6546250 - 6546987 | 26828.5 |
| sugar kinase | DUE52_26405 | Not Available | Negative | 6547020 - 6548015 | 36355.9 |
| mfs transporter | DUE52_26410 | Not Available | Negative | 6548205 - 6549542 | 49722.0 |
| mannonate dehydratase | DUE52_26415 | Not Available | Positive | 6549692 - 6550897 | 44898.2 |
| hypothetical protein | DUE52_26420 | Not Available | Positive | 6551070 - 6551711 | 24353.3 |
| glucuronate isomerase | DUE52_26425 | Not Available | Positive | 6551744 - 6553156 | 54341.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
