Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_26320 | Not Available | Positive | 6521596 - 6523014 | 51757.6 |
| hypothetical protein | DUE52_26335 | Not Available | Negative | 6525447 - 6527093 | 64035.1 |
| hypothetical protein | DUE52_26340 | Not Available | Negative | 6527206 - 6531498 | 155070.0 |
| luxr family transcriptional regulator | DUE52_26345 | Not Available | Negative | 6531618 - 6532241 | 23864.2 |
| doxx family protein | DUE52_26350 | Not Available | Positive | 6532593 - 6533012 | 15183.3 |
| esterase | DUE52_26355 | Not Available | Negative | 6533040 - 6534227 | 44150.8 |
| nudix hydrolase | DUE52_26360 | Not Available | Positive | 6534333 - 6535097 | 30079.1 |
| pkd domain-containing protein | DUE52_26365 | Not Available | Negative | 6535169 - 6538060 | 104361.0 |
| ycei family protein | DUE52_26370 | Not Available | Negative | 6538240 - 6538893 | 22995.8 |
| tonb-dependent receptor | DUE52_26375 | Not Available | Negative | 6538991 - 6541678 | 97326.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
