Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DUE52_26270 | Not Available | Positive | 6510806 - 6512170 | 50184.1 |
| phosphoglyceromutase | DUE52_26275 | Not Available | Negative | 6512201 - 6513301 | 40937.4 |
| duf4270 family protein | DUE52_26280 | Not Available | Negative | 6513651 - 6514964 | 48472.9 |
| duf4907 domain-containing protein | DUE52_26285 | Not Available | Negative | 6515005 - 6515337 | 12217.1 |
| galactose oxidase | DUE52_26290 | Not Available | Negative | 6515337 - 6516266 | 33898.2 |
| hypothetical protein | DUE52_26295 | Not Available | Negative | 6516494 - 6517465 | 36108.0 |
| pdz domain-containing protein | DUE52_26300 | Not Available | Negative | 6517491 - 6518945 | 53151.5 |
| hypothetical protein | DUE52_26305 | Not Available | Negative | 6519058 - 6519882 | 28693.0 |
| hypothetical protein | DUE52_26310 | Not Available | Negative | 6519930 - 6520595 | 25651.2 |
| rna polymerase sigma factor | DUE52_26315 | Not Available | Positive | 6520845 - 6521450 | 23463.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
