Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybjq family protein | DUE52_26170 | Not Available | Negative | 6488598 - 6488918 | 11204.6 |
| hypothetical protein | DUE52_26175 | Not Available | Positive | 6488997 - 6489179 | 6755.35 |
| hypothetical protein | DUE52_26180 | Not Available | Positive | 6489339 - 6489839 | 17691.8 |
| hypothetical protein | DUE52_26185 | Not Available | Positive | 6490363 - 6491034 | 26012.5 |
| hypothetical protein | DUE52_26190 | Not Available | Positive | 6491314 - 6492231 | 35498.1 |
| t9ss c-terminal target domain-containing protein | DUE52_26195 | Not Available | Positive | 6492329 - 6495745 | 121646.0 |
| hypothetical protein | DUE52_26200 | Not Available | Negative | 6495762 - 6495956 | 7262.87 |
| glycine cleavage system protein gcvh | DUE52_26205 | Not Available | Positive | 6495959 - 6496339 | 13691.1 |
| dihydroorotase | DUE52_26210 | Not Available | Positive | 6496391 - 6497686 | 47714.0 |
| duf4199 domain-containing protein | DUE52_26215 | Not Available | Positive | 6497693 - 6498289 | 22567.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
