Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_02560 | Not Available | Positive | 641475 - 645488 | 151000.0 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DUE52_02565 | Not Available | Positive | 645657 - 646817 | 43602.9 |
| sterol desaturase family protein | DUE52_02570 | Not Available | Positive | 647116 - 648342 | 47979.8 |
| tolc family protein | DUE52_02575 | Not Available | Negative | 648431 - 649777 | 49965.4 |
| acrb/acrd/acrf family protein | DUE52_02580 | Not Available | Negative | 650131 - 653199 | 112240.0 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_02585 | Not Available | Negative | 653315 - 654409 | 39531.9 |
| arsr family transcriptional regulator | DUE52_02590 | Not Available | Positive | 654610 - 654942 | 12113.8 |
| t9ss c-terminal target domain-containing protein | DUE52_02595 | Not Available | Negative | 654995 - 658378 | 120465.0 |
| cytochrome c | DUE52_02600 | Not Available | Positive | 658762 - 659124 | 13200.0 |
| formylglycine-generating enzyme family protein | DUE52_02605 | Not Available | Negative | 659128 - 660255 | 41219.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
