Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine dehydrogenase | DUE52_26120 | Not Available | Positive | 6476749 - 6477960 | 44031.6 |
| hypothetical protein | DUE52_26125 | Not Available | Positive | 6478056 - 6478463 | 15338.1 |
| hypothetical protein | DUE52_26130 | Not Available | Negative | 6478559 - 6480070 | 57303.9 |
| homoserine kinase | DUE52_26135 | Not Available | Negative | 6480276 - 6481205 | 32554.7 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | DUE52_26140 | Not Available | Negative | 6481275 - 6483737 | 89523.9 |
| vwa domain-containing protein | DUE52_26145 | Not Available | Positive | 6484043 - 6485146 | 42012.6 |
| ribbon-helix-helix protein, copg family | DUE52_26150 | Not Available | Positive | 6485156 - 6485386 | 8613.22 |
| type ii toxin-antitoxin system death-on-curing family toxin | DUE52_26155 | Not Available | Positive | 6485383 - 6485760 | 14207.9 |
| magnesium chelatase | DUE52_26160 | Not Available | Positive | 6485818 - 6487350 | 57272.7 |
| port family protein | DUE52_26165 | Not Available | Positive | 6487542 - 6488588 | 36401.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
