Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_26070 | Not Available | Positive | 6463716 - 6464543 | 30796.2 |
| dna-binding response regulator | DUE52_26075 | Not Available | Positive | 6464584 - 6465255 | 25652.1 |
| sensor histidine kinase | DUE52_26080 | Not Available | Positive | 6465266 - 6466621 | 50724.2 |
| hypothetical protein | DUE52_26085 | Not Available | Positive | 6466887 - 6467192 | 11556.1 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_26090 | Not Available | Positive | 6467199 - 6468281 | 40656.1 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DUE52_26095 | Not Available | Positive | 6468306 - 6471515 | 117825.0 |
| tolc family protein | DUE52_26100 | Not Available | Positive | 6471505 - 6472938 | 53423.0 |
| phospho-sugar mutase | DUE52_26105 | Not Available | Positive | 6473060 - 6474817 | 64610.7 |
| oxidoreductase | DUE52_26110 | Not Available | Negative | 6475025 - 6476056 | 38712.1 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DUE52_26115 | Not Available | Positive | 6476223 - 6476633 | 15457.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
