Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | DUE52_26020 | Not Available | Positive | 6447043 - 6449196 | 79822.7 |
| high-potential iron-sulfur protein | DUE52_26025 | Not Available | Positive | 6449217 - 6449579 | 12786.3 |
| hypothetical protein | DUE52_26030 | Not Available | Positive | 6449816 - 6450178 | 12356.7 |
| hypothetical protein | DUE52_26035 | Not Available | Positive | 6450249 - 6450800 | 19730.4 |
| tolc family protein | DUE52_26040 | Not Available | Negative | 6450814 - 6452211 | 51425.7 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_26045 | Not Available | Negative | 6452208 - 6453314 | 40954.8 |
| acrb/acrd/acrf family protein | DUE52_26050 | Not Available | Negative | 6453355 - 6456528 | 115590.0 |
| translocation/assembly module tamb | DUE52_26055 | Not Available | Negative | 6456981 - 6461624 | 171586.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DUE52_26060 | Not Available | Positive | 6461769 - 6462764 | 36249.9 |
| mosc domain-containing protein | DUE52_26065 | Not Available | Positive | 6462807 - 6463646 | 31900.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
