Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | DUE52_25970 | Not Available | Negative | 6437170 - 6437808 | 24363.7 |
| hotdog fold thioesterase | DUE52_25975 | Not Available | Positive | 6437999 - 6438418 | 15401.6 |
| response regulator | DUE52_25980 | Not Available | Positive | 6438535 - 6438990 | 17269.7 |
| histidine kinase | DUE52_25985 | Not Available | Negative | 6439047 - 6440090 | 40758.7 |
| dna-binding response regulator | DUE52_25990 | Not Available | Negative | 6440092 - 6440859 | 29595.3 |
| isochorismate synthase | DUE52_25995 | Not Available | Positive | 6441093 - 6442328 | 46178.7 |
| hypothetical protein | DUE52_26000 | Not Available | Positive | 6442450 - 6442692 | 8243.34 |
| hypothetical protein | DUE52_26005 | Not Available | Positive | 6442928 - 6445174 | 85992.1 |
| dna-binding response regulator | DUE52_26010 | Not Available | Positive | 6445187 - 6445816 | 23460.9 |
| amidohydrolase | DUE52_26015 | Not Available | Positive | 6446047 - 6447000 | 35366.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
