Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf983 domain-containing protein | DUE52_25920 | Not Available | Positive | 6427272 - 6427649 | 14661.1 |
| tonb-dependent receptor | DUE52_25925 | Not Available | Negative | 6427932 - 6430313 | 87529.1 |
| hypothetical protein | DUE52_25930 | Not Available | Positive | 6430313 - 6430525 | 8381.07 |
| Trna-asp | Not Available | Not Available | Positive | 6430850 - 6430926 | Not Available |
| dinb family protein | DUE52_25940 | Not Available | Positive | 6431024 - 6431545 | 19695.3 |
| nif3-like dinuclear metal center hexameric protein | DUE52_25945 | Not Available | Positive | 6431542 - 6432663 | 41031.1 |
| hypothetical protein | DUE52_25950 | Not Available | Positive | 6432682 - 6433431 | 28617.1 |
| tetratricopeptide repeat protein | DUE52_25955 | Not Available | Positive | 6433539 - 6435011 | 56278.5 |
| dna-binding response regulator | DUE52_25960 | Not Available | Negative | 6435101 - 6435832 | 28021.7 |
| sensor histidine kinase | DUE52_25965 | Not Available | Negative | 6435936 - 6437003 | 41101.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
