Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazole carboxylase | DUE52_25865 | Not Available | Positive | 6414914 - 6415234 | 12148.5 |
| sugar phosphate isomerase/epimerase | DUE52_25870 | Not Available | Negative | 6415290 - 6416234 | 34892.0 |
| hypothetical protein | DUE52_25875 | Not Available | Negative | 6416390 - 6416794 | 14624.8 |
| beta-n-acetylglucosaminidase | DUE52_25880 | Not Available | Negative | 6416937 - 6418739 | 65930.3 |
| phospholipase c, phosphocholine-specific | DUE52_25885 | Not Available | Negative | 6418930 - 6421512 | 97839.8 |
| glycosyl hydrolase family 5 | DUE52_25890 | Not Available | Positive | 6421659 - 6422804 | 43186.3 |
| pseudouridylate synthase | DUE52_25895 | Not Available | Positive | 6422804 - 6423526 | 27529.5 |
| sensor histidine kinase | DUE52_25905 | Not Available | Negative | 6423559 - 6425049 | 56299.7 |
| hypothetical protein | DUE52_25910 | Not Available | Negative | 6425136 - 6425435 | 11477.0 |
| acetyl-coa hydrolase/transferase family protein | DUE52_25915 | Not Available | Negative | 6425758 - 6427050 | 47216.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
