Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_25815 | Not Available | Negative | 6403707 - 6404168 | 17257.6 |
| gtp-binding protein | DUE52_25820 | Not Available | Negative | 6404272 - 6405498 | 46040.4 |
| merc domain-containing protein | DUE52_25825 | Not Available | Negative | 6405533 - 6405907 | 13738.0 |
| had family phosphatase | DUE52_25830 | Not Available | Positive | 6406372 - 6406977 | 23272.6 |
| alpha-l-rhamnosidase | DUE52_25835 | Not Available | Positive | 6407332 - 6409083 | 65107.4 |
| methyltransferase domain-containing protein | DUE52_25840 | Not Available | Positive | 6409120 - 6409743 | 23324.5 |
| hypothetical protein | DUE52_25845 | Not Available | Negative | 6410174 - 6411004 | 30586.7 |
| rhodanese-like domain-containing protein | DUE52_25850 | Not Available | Positive | 6411231 - 6411533 | 10756.1 |
| tetratricopeptide repeat protein | DUE52_25855 | Not Available | Positive | 6411642 - 6413066 | 52930.5 |
| gfo/idh/moca family oxidoreductase | DUE52_25860 | Not Available | Positive | 6413175 - 6414635 | 54467.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
