Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2807 domain-containing protein | DUE52_25765 | Not Available | Negative | 6390434 - 6391183 | 26400.1 |
| hypothetical protein | DUE52_25770 | Not Available | Positive | 6391183 - 6391374 | 7450.14 |
| glycosidase | DUE52_25775 | Not Available | Positive | 6391438 - 6392532 | 41308.3 |
| atp-binding cassette domain-containing protein | DUE52_25780 | Not Available | Negative | 6392598 - 6394100 | 56116.1 |
| atp-dependent helicase | DUE52_25785 | Not Available | Negative | 6394261 - 6397623 | 128552.0 |
| glycoside hydrolase family 127 protein | DUE52_25790 | Not Available | Positive | 6397758 - 6399728 | 73898.9 |
| sensor histidine kinase | DUE52_25795 | Not Available | Negative | 6399718 - 6401040 | 49008.2 |
| dna-binding response regulator | DUE52_25800 | Not Available | Negative | 6401037 - 6401708 | 24823.3 |
| hypothetical protein | DUE52_25805 | Not Available | Negative | 6401821 - 6402642 | 28714.4 |
| nad(p)/fad-dependent oxidoreductase | DUE52_25810 | Not Available | Negative | 6402748 - 6403662 | 33096.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
