Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase family protein | DUE52_25715 | Not Available | Negative | 6378785 - 6379357 | 21196.3 |
| tetratricopeptide repeat protein | DUE52_25720 | Not Available | Negative | 6379401 - 6381392 | 75472.8 |
| 30s ribosomal protein thx | DUE52_25725 | Not Available | Negative | 6381444 - 6381560 | 4300.4 |
| duf2892 domain-containing protein | DUE52_25730 | Not Available | Positive | 6381794 - 6382591 | 28573.8 |
| sterol desaturase family protein | DUE52_25735 | Not Available | Positive | 6382801 - 6383628 | 32686.1 |
| tigr03643 family protein | DUE52_25740 | Not Available | Positive | 6383724 - 6384056 | 13002.5 |
| dna-binding response regulator | DUE52_25745 | Not Available | Negative | 6384020 - 6384730 | 26854.7 |
| hypothetical protein | DUE52_25750 | Not Available | Negative | 6384727 - 6385764 | 39322.1 |
| hypothetical protein | DUE52_25755 | Not Available | Positive | 6385838 - 6388456 | 98082.6 |
| atp-binding cassette domain-containing protein | DUE52_25760 | Not Available | Negative | 6388591 - 6390213 | 60959.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
