Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent alcohol dehydrogenase | DUE52_25665 | Not Available | Positive | 6365059 - 6366027 | 35112.6 |
| peptidase c1 | DUE52_25670 | Not Available | Negative | 6366198 - 6368174 | 74127.8 |
| vwa domain-containing protein | DUE52_25675 | Not Available | Negative | 6368206 - 6370851 | 99237.9 |
| threonylcarbamoyl-amp synthase | DUE52_25680 | Not Available | Negative | 6370986 - 6371942 | 34283.8 |
| hypothetical protein | DUE52_25685 | Not Available | Positive | 6372053 - 6372406 | 12846.4 |
| rna polymerase subunit sigma-24 | DUE52_25690 | Not Available | Positive | 6372579 - 6373763 | 44772.3 |
| gmc family oxidoreductase | DUE52_25695 | Not Available | Positive | 6373907 - 6375649 | 63184.3 |
| gluconate 2-dehydrogenase subunit 3 family protein | DUE52_25700 | Not Available | Positive | 6375759 - 6376385 | 22973.7 |
| gfo/idh/moca family oxidoreductase | DUE52_25705 | Not Available | Positive | 6376500 - 6377591 | 40336.7 |
| gliding motility-associated c-terminal domain-containing protein | DUE52_25710 | Not Available | Positive | 6377609 - 6378796 | 43344.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
