Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nipsnap family containing protein | DUE52_25615 | Not Available | Positive | 6352953 - 6353747 | 29986.8 |
| hypothetical protein | DUE52_25620 | Not Available | Negative | 6353744 - 6353950 | 7368.93 |
| hypothetical protein | DUE52_25625 | Not Available | Positive | 6354083 - 6354514 | 16388.7 |
| hypothetical protein | DUE52_25630 | Not Available | Positive | 6354714 - 6355100 | 14437.5 |
| cusa/czca family heavy metal efflux rnd transporter | DUE52_25635 | Not Available | Positive | 6355280 - 6359701 | 161533.0 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_25640 | Not Available | Positive | 6359704 - 6360951 | 44841.9 |
| arsr family transcriptional regulator | DUE52_25645 | Not Available | Positive | 6361087 - 6361755 | 25058.4 |
| hypothetical protein | DUE52_25650 | Not Available | Positive | 6361827 - 6362090 | 10331.5 |
| response regulator | DUE52_25655 | Not Available | Positive | 6362069 - 6362509 | 16668.1 |
| acylase | DUE52_25660 | Not Available | Positive | 6362778 - 6364877 | 78113.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
