Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DUE52_25560 | Not Available | Positive | 6341086 - 6342324 | 44627.7 |
| Trna-leu | Not Available | Not Available | Positive | 6342481 - 6342567 | Not Available |
| histidine kinase | DUE52_25570 | Not Available | Positive | 6342771 - 6344396 | 61583.9 |
| dna-binding response regulator | DUE52_25575 | Not Available | Positive | 6344396 - 6345145 | 28557.5 |
| pkd domain-containing protein | DUE52_25580 | Not Available | Positive | 6345375 - 6347021 | 58722.8 |
| hypothetical protein | DUE52_25585 | Not Available | Positive | 6347018 - 6347776 | 27687.9 |
| caspase family protein | DUE52_25590 | Not Available | Positive | 6347667 - 6348905 | 45587.8 |
| hypothetical protein | DUE52_25595 | Not Available | Negative | 6349042 - 6349242 | 7845.87 |
| hypothetical protein | DUE52_25600 | Not Available | Negative | 6349261 - 6349512 | 8397.6 |
| hypothetical protein | DUE52_25610 | Not Available | Negative | 6349808 - 6352381 | 91229.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
