Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yihy/virulence factor brkb family protein | DUE52_25460 | Not Available | Positive | 6321021 - 6321989 | 35777.3 |
| hypothetical protein | DUE52_25465 | Not Available | Negative | 6321990 - 6322193 | 7811.18 |
| glutamine--trna ligase/yqey domain fusion protein | DUE52_25470 | Not Available | Negative | 6322233 - 6323966 | 66384.1 |
| hypothetical protein | DUE52_25475 | Not Available | Negative | 6324031 - 6324627 | 22347.6 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DUE52_25480 | Not Available | Negative | 6324741 - 6325703 | 33487.1 |
| electron transfer flavoprotein beta subunit/fixa family protein | DUE52_25485 | Not Available | Negative | 6325839 - 6326576 | 26329.0 |
| tetratricopeptide repeat protein | DUE52_25490 | Not Available | Positive | 6326754 - 6327080 | 12759.7 |
| alpha-glucan family phosphorylase | DUE52_25495 | Not Available | Positive | 6327234 - 6328892 | 63451.5 |
| peptidase m10 | DUE52_25500 | Not Available | Negative | 6328987 - 6329712 | 27008.8 |
| purine-nucleoside phosphorylase | DUE52_25505 | Not Available | Negative | 6329812 - 6330627 | 29269.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
