Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_25410 | Not Available | Positive | 6312432 - 6312947 | 19881.0 |
| hypothetical protein | DUE52_25415 | Not Available | Positive | 6312966 - 6313544 | 21731.5 |
| transcriptional regulator | DUE52_25420 | Not Available | Positive | 6313546 - 6313830 | 10602.9 |
| abc transporter permease | DUE52_25425 | Not Available | Positive | 6313952 - 6316372 | 91626.2 |
| coce/nond family hydrolase | DUE52_25430 | Not Available | Positive | 6316413 - 6318278 | 70780.7 |
| hypothetical protein | DUE52_25435 | Not Available | Negative | 6318284 - 6319348 | 39182.4 |
| duf86 domain-containing protein | DUE52_25440 | Not Available | Negative | 6319563 - 6319691 | 4899.92 |
| duf86 domain-containing protein | DUE52_25445 | Not Available | Negative | 6319716 - 6319925 | 7938.39 |
| nucleotidyltransferase | DUE52_25450 | Not Available | Negative | 6319915 - 6320211 | 11095.2 |
| dna starvation/stationary phase protection protein | DUE52_25455 | Not Available | Negative | 6320341 - 6320811 | 18312.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
