Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | DUE52_25360 | Not Available | Negative | 6301736 - 6302854 | 41844.2 |
| sugar phosphate isomerase/epimerase | DUE52_25365 | Not Available | Negative | 6303035 - 6303895 | 31955.7 |
| glycosyl hydrolase | DUE52_25370 | Not Available | Negative | 6303895 - 6305274 | 51854.6 |
| hypothetical protein | DUE52_25375 | Not Available | Negative | 6305449 - 6307353 | 69989.4 |
| blai/meci/copy family transcriptional regulator | DUE52_25380 | Not Available | Negative | 6307340 - 6307729 | 14869.8 |
| is110 family transposase | DUE52_25385 | Not Available | Positive | 6308209 - 6309225 | 38143.8 |
| hypothetical protein | DUE52_25390 | Not Available | Positive | 6309658 - 6310158 | 19353.1 |
| abc transporter permease | DUE52_25395 | Not Available | Positive | 6310137 - 6310316 | 6624.29 |
| leucine-rich repeat domain-containing protein | DUE52_25400 | Not Available | Positive | 6310417 - 6311880 | 55529.1 |
| arsr family transcriptional regulator | DUE52_25405 | Not Available | Negative | 6311874 - 6312200 | 11985.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
