Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | DUE52_25310 | Not Available | Negative | 6294371 - 6295285 | 32390.0 |
| hypothetical protein | DUE52_25315 | Not Available | Negative | 6295419 - 6295604 | 7114.43 |
| hypothetical protein | DUE52_25320 | Not Available | Negative | 6295640 - 6296026 | 14622.3 |
| csbd family protein | DUE52_25325 | Not Available | Negative | 6296389 - 6296574 | 6877.04 |
| duf2147 domain-containing protein | DUE52_25330 | Not Available | Negative | 6296705 - 6297154 | 16734.2 |
| hypothetical protein | DUE52_25335 | Not Available | Negative | 6297151 - 6297351 | 7570.29 |
| acyl-coa thioesterase | DUE52_25340 | Not Available | Positive | 6297355 - 6297900 | 21507.4 |
| mfs transporter | DUE52_25345 | Not Available | Negative | 6298048 - 6299292 | 45221.9 |
| gfo/idh/moca family oxidoreductase | DUE52_25350 | Not Available | Negative | 6299414 - 6300718 | 48461.4 |
| 3-ketoacyl-acp reductase | DUE52_25355 | Not Available | Negative | 6300854 - 6301624 | 27635.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
