Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_25260 | Not Available | Positive | 6285280 - 6286350 | 41712.7 |
| helix-turn-helix domain-containing protein | DUE52_25265 | Not Available | Positive | 6286433 - 6286756 | 12000.5 |
| hypothetical protein | DUE52_25270 | Not Available | Positive | 6286753 - 6287148 | 14915.7 |
| hypothetical protein | DUE52_25275 | Not Available | Positive | 6287194 - 6287397 | 7476.9 |
| hypothetical protein | DUE52_25280 | Not Available | Positive | 6287413 - 6288063 | 25202.8 |
| gmc family oxidoreductase | DUE52_25285 | Not Available | Negative | 6288614 - 6290317 | 63282.9 |
| gluconate 2-dehydrogenase subunit 3 family protein | DUE52_25290 | Not Available | Negative | 6290350 - 6290877 | 18923.1 |
| hypothetical protein | DUE52_25295 | Not Available | Negative | 6291066 - 6292133 | 40969.0 |
| histidine kinase | DUE52_25300 | Not Available | Negative | 6292262 - 6293269 | 38456.4 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_25305 | Not Available | Positive | 6293526 - 6294287 | 26822.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
