Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DUE52_25205 | Not Available | Negative | 6268290 - 6271652 | 121342.0 |
| response regulator | DUE52_25210 | Not Available | Positive | 6272272 - 6272721 | 16763.6 |
| hypothetical protein | DUE52_25215 | Not Available | Negative | 6272742 - 6273254 | 19415.1 |
| hypothetical protein | DUE52_25220 | Not Available | Negative | 6273343 - 6273750 | 14780.1 |
| glycoside hydrolase | DUE52_25225 | Not Available | Positive | 6274018 - 6275181 | 43042.9 |
| duf808 domain-containing protein | DUE52_25230 | Not Available | Negative | 6275250 - 6276125 | 30735.4 |
| response regulator | DUE52_25235 | Not Available | Positive | 6276331 - 6279612 | 123383.0 |
| t9ss c-terminal target domain-containing protein | DUE52_25245 | Not Available | Positive | 6281135 - 6282901 | 63743.5 |
| hypothetical protein | DUE52_25250 | Not Available | Positive | 6282967 - 6283518 | 19478.8 |
| site-specific integrase | DUE52_25255 | Not Available | Positive | 6283905 - 6285257 | 52724.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
