Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sis domain-containing protein | DUE52_25155 | Not Available | Negative | 6256713 - 6257273 | 20660.4 |
| rok family protein | DUE52_25160 | Not Available | Negative | 6257335 - 6258228 | 31452.7 |
| duf1264 domain-containing protein | DUE52_25165 | Not Available | Negative | 6258324 - 6259058 | 27248.5 |
| hypothetical protein | DUE52_25170 | Not Available | Negative | 6259232 - 6259915 | 25613.2 |
| dehydrogenase | DUE52_25175 | Not Available | Positive | 6260166 - 6263033 | 106662.0 |
| hypothetical protein | DUE52_25180 | Not Available | Positive | 6263259 - 6263663 | 14822.5 |
| gaf domain-containing protein | DUE52_25185 | Not Available | Negative | 6263726 - 6265087 | 50672.9 |
| hypothetical protein | DUE52_25190 | Not Available | Positive | 6265250 - 6265798 | 21553.1 |
| hypothetical protein | DUE52_25195 | Not Available | Negative | 6265887 - 6266291 | 14271.3 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_25200 | Not Available | Negative | 6266484 - 6268205 | 64379.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
