Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m3 family oligoendopeptidase | DUE52_02460 | Not Available | Positive | 617522 - 619309 | 68774.9 |
| hypothetical protein | DUE52_02465 | Not Available | Positive | 619476 - 619706 | 8626.39 |
| nad-dependent epimerase/dehydratase family protein | DUE52_02470 | Not Available | Positive | 619917 - 620990 | 40977.1 |
| hypothetical protein | DUE52_02475 | Not Available | Positive | 621056 - 622759 | 64475.4 |
| hypothetical protein | DUE52_02480 | Not Available | Positive | 622749 - 623699 | 36412.5 |
| phytanoyl-coa dioxygenase | DUE52_02485 | Not Available | Positive | 623866 - 624681 | 31013.8 |
| glycosyltransferase family 2 protein | DUE52_02490 | Not Available | Positive | 624683 - 625654 | 37553.2 |
| glycosyltransferase family 2 protein | DUE52_02495 | Not Available | Positive | 625651 - 626415 | 29315.5 |
| gnat family n-acetyltransferase | DUE52_02500 | Not Available | Positive | 626442 - 627221 | 28797.1 |
| hypothetical protein | DUE52_02505 | Not Available | Negative | 627255 - 627746 | 18139.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
