Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | DUE52_00185 | Not Available | Negative | 43771 - 44682 | 34777.6 |
| 3'-5' exonuclease | DUE52_00190 | Not Available | Positive | 44801 - 45331 | 19678.9 |
| peptidase m15 | DUE52_00195 | Not Available | Negative | 45350 - 45943 | 22565.2 |
| hypothetical protein | DUE52_00200 | Not Available | Positive | 46176 - 47411 | 44467.7 |
| hypothetical protein | DUE52_00205 | Not Available | Positive | 47459 - 47704 | 9484.31 |
| dna-binding protein | DUE52_00210 | Not Available | Positive | 47738 - 48175 | 16787.3 |
| serine hydrolase | DUE52_00215 | Not Available | Positive | 48427 - 51423 | 111268.0 |
| damage-inducible protein dinb | DUE52_00220 | Not Available | Positive | 51481 - 51933 | 17194.6 |
| hypothetical protein | DUE52_00225 | Not Available | Negative | 51982 - 53748 | 68800.8 |
| ghkl domain-containing protein | DUE52_00230 | Not Available | Negative | 54116 - 55444 | 49492.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
